Spires.py: Difference between revisions
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(take account of curly brackets in SPIRES BiBTeX titles) |
(use old API after new INSPIRE release) |
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(9 intermediate revisions by 2 users not shown) | |||
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Copy the following text into a file called spires.py | Copy the following text into a file called spires.py and save it. | ||
Further usage instructions are available at [[SPIRES_script]]. | |||
<pre> | <pre> | ||
#! /usr/bin/python | #! /usr/bin/python | ||
## SPIRES script version 0. | ## SPIRES script version 0.6 | ||
## updated for inSPIRE | |||
## Copyright | ## Copyright 2015 Tom Brown | ||
## This program is free software; you can redistribute it and/or | ## This program is free software; you can redistribute it and/or | ||
Line 51: | Line 55: | ||
''' | ''' | ||
__version__ = "0. | __version__ = "0.6" | ||
__author__ = "Tom Brown" | __author__ = "Tom Brown" | ||
__copyright__ = "Copyright | __copyright__ = "Copyright 2015 Tom Brown, GNU GPL 3" | ||
Line 59: | Line 63: | ||
#\d is a decimal digit; \D is anything but a decimal digit | |||
def findRefType(ref): | def findRefType(ref): | ||
ref = ref.replace('arxiv:','') | ref = ref.replace('arxiv:','') | ||
if re.search(r'^[a-zA-Z\-]+/\d{7}$',ref): | if re.search(r'^[a-zA-Z\-\.]+/\d{7}$',ref): | ||
rType = 'old-style eprint' | |||
elif re.search(r'^\d{7}$',ref): | elif re.search(r'^\d{7}$',ref): | ||
rType = 'old-style eprint' | |||
ref = 'hep-th/' + ref | ref = 'hep-th/' + ref | ||
elif re.search('^\d{4}\.\d{4}$',ref): | elif re.search('^\d{4}\.\d{4,5}$',ref): | ||
rType = 'new-style eprint' | |||
elif re.search(r'^\D+:\d{4}[a-zA-Z]{2}$',ref): | elif re.search(r'^\D+:\d{4}[a-zA-Z]{2,3}$',ref): | ||
rType = 'texkey' | |||
else: | else: | ||
rType = 'journal' | |||
return | return rType, ref | ||
def getBiBTeX(ref, | def getBiBTeX(ref,rType): | ||
if | if rType == 'old-style eprint': | ||
query = 'eprint | query = 'p=find+eprint+' + ref | ||
elif | elif rType == 'new-style eprint': | ||
query = 'eprint | query = 'p=find+eprint+' + ref | ||
elif | elif rType == 'texkey': | ||
query = 'texkey=' + ref | query = 'texkey=' + ref | ||
elif | elif rType == 'journal': | ||
query = 'j=' + ref | query = 'j=' + ref | ||
else: | else: | ||
return "no records were found in SPIRES to match your search, please try again" | return "no records were found in SPIRES to match your search, please try again" | ||
BiBTeX = urllib.urlopen('http:// | #http://inspirehep.net/search?p=hep-th%2F9711200&of=hx | ||
#http://inspirehep.net/search?p=1101.0121&of=hx | |||
BiBTeX = urllib.urlopen('http://old.inspirehep.net/search?' + query + '&of=hx').read() | |||
if 'No records' in BiBTeX: | if 'No records' in BiBTeX: | ||
return "no records were found in SPIRES to match your search, please try again" | return "no records were found in SPIRES to match your search, please try again" | ||
BiBTeX = BiBTeX[BiBTeX.find('< | BiBTeX = BiBTeX[BiBTeX.find('<pre>'):] | ||
BiBTeX = BiBTeX[BiBTeX.find('@'):] | BiBTeX = BiBTeX[BiBTeX.find('@'):] | ||
BiBTeX = BiBTeX[:BiBTeX.rfind(' | BiBTeX = BiBTeX[:BiBTeX.rfind('/pre>')] | ||
BiBTeX = BiBTeX[:BiBTeX.rfind('}')+1] | BiBTeX = BiBTeX[:BiBTeX.rfind('}')+1] | ||
Line 104: | Line 114: | ||
def getBibitem(ref, | def getBibitem(ref,rType): | ||
if | if rType == 'old-style eprint': | ||
query = 'eprint | query = 'p=find+eprint+' + ref | ||
elif | elif rType == 'new-style eprint': | ||
query = 'eprint | query = 'p=find+eprint+' + ref | ||
elif | elif rType == 'texkey': | ||
query = 'texkey=' + ref | query = 'texkey=' + ref | ||
elif | elif rType == 'journal': | ||
query = 'j=' + ref | query = 'j=' + ref | ||
else: | else: | ||
return "no records were found in SPIRES to match your search, please try again" | return "no records were found in SPIRES to match your search, please try again" | ||
bibitem = urllib.urlopen('http:// | bibitem = urllib.urlopen('http://old.inspirehep.net/search?' + query + '&of=hlxe').read() | ||
if 'No records' in bibitem: | if 'No records' in bibitem: | ||
return "no records were found in SPIRES to match your search, please try again" | return "no records were found in SPIRES to match your search, please try again" | ||
bibitem = bibitem[bibitem.find('< | bibitem = bibitem[bibitem.find('<pre>')+5:bibitem.rfind('/pre>')-1] | ||
#treat newlines correctly | |||
bibitem = bibitem | bibitem = bibitem.replace("<br>","\n").replace("<br />","\n").replace("&nbsp;"," ") | ||
return bibitem | return bibitem | ||
Line 161: | Line 170: | ||
def downloadeprint(ref, | def downloadeprint(ref,rType,downloadPath): | ||
downloadPath = os.path.expanduser(downloadPath) | downloadPath = os.path.expanduser(downloadPath) | ||
if | if rType == 'old-style eprint': | ||
urllib.urlretrieve('http://arxiv.org/pdf/' + ref, downloadPath + ref.replace('/','-') + '.pdf') | urllib.urlretrieve('http://arxiv.org/pdf/' + ref, downloadPath + ref.replace('/','-') + '.pdf') | ||
elif | elif rType == 'new-style eprint': | ||
urllib.urlretrieve('http://arxiv.org/pdf/' + ref, downloadPath + ref + '.pdf') | urllib.urlretrieve('http://arxiv.org/pdf/' + ref, downloadPath + ref + '.pdf') | ||
Line 192: | Line 201: | ||
f=open(fileName, 'r') | f=open(fileName, 'r') | ||
data = f.read() | data = f.read() | ||
f.close() | |||
if data.find(r'\begin{thebibliography}') >= 0: | if data.find(r'\begin{thebibliography}') >= 0: | ||
Line 288: | Line 298: | ||
citeOpt = 1 | citeOpt = 1 | ||
print ref | |||
rType, ref = findRefType(ref) | |||
print rType, ref | |||
if verboseOpt: | if verboseOpt: | ||
print 'the reference ' + ref + ' is a(n) ' + | print 'the reference ' + ref + ' is a(n) ' + rType | ||
if (bibtexOpt + authorOpt + titleOpt + citeOpt + libraryOpt) > 0: | if (bibtexOpt + authorOpt + titleOpt + citeOpt + libraryOpt) > 0: | ||
BiBTeX = getBiBTeX(ref, | BiBTeX = getBiBTeX(ref,rType) | ||
if 'no records' in BiBTeX: | if 'no records' in BiBTeX: | ||
print BiBTeX | print BiBTeX | ||
Line 304: | Line 315: | ||
if bibitemOpt: | if bibitemOpt: | ||
bibitem = getBibitem(ref, | bibitem = getBibitem(ref,rType) | ||
print bibitem | print bibitem | ||
if 'no records' in bibitem: | if 'no records' in bibitem: | ||
Line 327: | Line 338: | ||
if downloadOpt: | if downloadOpt: | ||
downloadeprint(ref, | downloadeprint(ref,rType,downloadPath) | ||
</pre> | </pre> |
Latest revision as of 09:51, 31 March 2020
Copy the following text into a file called spires.py and save it.
Further usage instructions are available at SPIRES_script.
#! /usr/bin/python ## SPIRES script version 0.6 ## updated for inSPIRE ## Copyright 2015 Tom Brown ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as ## published by the Free Software Foundation; either version 3 of the ## License, or (at your option) any later version. ## This program is distributed in the hope that it will be useful, ## but WITHOUT ANY WARRANTY; without even the implied warranty of ## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ## GNU General Public License for more details. ## You should have received a copy of the GNU General Public License ## along with this program. If not, see <http://www.gnu.org/licenses/>. ## See http://www.stringwiki.org/wiki/SPIRES_script for more usage ## instructions '''SPIRES script Usage: python spires.py reference [ -hbiatcev ] [ --help ] [ --library library.bib ] [ --download download_path/ ] "reference" must be a standard arXiv reference, e.g. hep-th/9711200, 0705.0303, Maldacena:1997re or a SPIRES journal reference, e.g. CMPHA,43,199 Options: -h, --help displays this help message -b displays the BiBTeX entry -i displays the bibitem entry -a displays the author(s) -t displays the title -c displays the TeX citation key -e displays everything -v verbose mode --download download_path/ for arXiv references downloads a pdf of the paper from the arXiv to the directory download_path/ --library library.bib if it is not already in library.bib, appends the BiBTeX entry to library.bib; use at your own risk ''' __version__ = "0.6" __author__ = "Tom Brown" __copyright__ = "Copyright 2015 Tom Brown, GNU GPL 3" import sys, os, getopt, re, urllib #\d is a decimal digit; \D is anything but a decimal digit def findRefType(ref): ref = ref.replace('arxiv:','') if re.search(r'^[a-zA-Z\-\.]+/\d{7}$',ref): rType = 'old-style eprint' elif re.search(r'^\d{7}$',ref): rType = 'old-style eprint' ref = 'hep-th/' + ref elif re.search('^\d{4}\.\d{4,5}$',ref): rType = 'new-style eprint' elif re.search(r'^\D+:\d{4}[a-zA-Z]{2,3}$',ref): rType = 'texkey' else: rType = 'journal' return rType, ref def getBiBTeX(ref,rType): if rType == 'old-style eprint': query = 'p=find+eprint+' + ref elif rType == 'new-style eprint': query = 'p=find+eprint+' + ref elif rType == 'texkey': query = 'texkey=' + ref elif rType == 'journal': query = 'j=' + ref else: return "no records were found in SPIRES to match your search, please try again" #http://inspirehep.net/search?p=hep-th%2F9711200&of=hx #http://inspirehep.net/search?p=1101.0121&of=hx BiBTeX = urllib.urlopen('http://old.inspirehep.net/search?' + query + '&of=hx').read() if 'No records' in BiBTeX: return "no records were found in SPIRES to match your search, please try again" BiBTeX = BiBTeX[BiBTeX.find('<pre>'):] BiBTeX = BiBTeX[BiBTeX.find('@'):] BiBTeX = BiBTeX[:BiBTeX.rfind('/pre>')] BiBTeX = BiBTeX[:BiBTeX.rfind('}')+1] return BiBTeX def getBibitem(ref,rType): if rType == 'old-style eprint': query = 'p=find+eprint+' + ref elif rType == 'new-style eprint': query = 'p=find+eprint+' + ref elif rType == 'texkey': query = 'texkey=' + ref elif rType == 'journal': query = 'j=' + ref else: return "no records were found in SPIRES to match your search, please try again" bibitem = urllib.urlopen('http://old.inspirehep.net/search?' + query + '&of=hlxe').read() if 'No records' in bibitem: return "no records were found in SPIRES to match your search, please try again" bibitem = bibitem[bibitem.find('<pre>')+5:bibitem.rfind('/pre>')-1] #treat newlines correctly bibitem = bibitem.replace("<br>","\n").replace("<br />","\n").replace(" "," ") return bibitem def extractauthor(BiBTeX): # remove excess white space and replace with a single space data = re.sub(r'\s+',r' ',BiBTeX) author = data[data.find('author'):] author = author[author.find('\"')+1:] author = author[:author.find('\"')] return author def extracttitle(BiBTeX): # remove excess white space and replace with a single space data = re.sub(r'\s+',r' ',BiBTeX) title = data[data.find('title'):] title = title[title.find('\"')+2:] title = title[:title.find('\"')-1] return title def extractcite(BiBTeX): cite = BiBTeX[BiBTeX.find('{')+1:BiBTeX.find(',')] return cite def downloadeprint(ref,rType,downloadPath): downloadPath = os.path.expanduser(downloadPath) if rType == 'old-style eprint': urllib.urlretrieve('http://arxiv.org/pdf/' + ref, downloadPath + ref.replace('/','-') + '.pdf') elif rType == 'new-style eprint': urllib.urlretrieve('http://arxiv.org/pdf/' + ref, downloadPath + ref + '.pdf') def updatelibrary(cite,BiBTeX,BiBTeXlibraryFileName): BiBTeXlibraryFileName = os.path.expanduser(BiBTeXlibraryFileName) libraryfile = open(BiBTeXlibraryFileName, 'r') library = libraryfile.read() libraryfile.close() if library.count(cite) == 0: print 'adding BiBTeX entry to ' + BiBTeXlibraryFileName #find the end of the file (the second argument means count from #the end of the file libraryfile = open(BiBTeXlibraryFileName, 'a') libraryfile.write('\n' + BiBTeX + '\n') libraryfile.close() else: print 'BiBTeX entry already in library' def listCitations(fileName): fileName = os.path.expanduser(fileName) f=open(fileName, 'r') data = f.read() f.close() if data.find(r'\begin{thebibliography}') >= 0: data = data[:data.find(r'\begin{thebibliography}')] citations = [] while(data.find(r'\cite{') >=0): data = data[data.find(r'\cite{') + 6:] if(data.find('}') >=0): citation = data[:data.find('}')] data = data[data.find('}')+1:] citation = citation + ',' while(citation.find(',') >=0): if citation[:citation.find(',')] not in citations: citations.append(citation[:citation.find(',')]) citation = citation[citation.find(',')+1:] return citations if __name__ == "__main__": authorOpt = 0 titleOpt = 0 bibtexOpt = 0 bibitemOpt = 0 citeOpt = 0 verboseOpt = 0 libraryOpt = 0 downloadOpt = 0 try: options, arguments = getopt.gnu_getopt(sys.argv[1:], 'hbiatcev', ['help','library=','download=']) except getopt.error: print 'error: you tried to use an unknown option or the argument for an option that requires it was missing; try \'spires.py -h\' for more information' sys.exit(0) for o,a in options: if o in ('-h','--help'): print __doc__ sys.exit(0) elif o == '--library': if a == '': print '--library expects an argument' sys.exit(0) libraryOpt = 1 BiBTeXlibraryFileName = os.path.expanduser(a) print 'library file name is ' + BiBTeXlibraryFileName elif o == '--download': downloadOpt = 1 if a == '': a = './' elif a[-1] != '/': a = a + '/' downloadPath = os.path.expanduser(a) print 'download path is ' + downloadPath elif o == '-b': bibtexOpt = 1 elif o == '-i': bibitemOpt = 1 elif o == '-a': authorOpt = 1 elif o == '-t': titleOpt = 1 elif o == '-c': citeOpt = 1 elif o == '-e': bibtexOpt = 1 authorOpt = 1 titleOpt = 1 citeOpt = 1 elif o == '-v': verboseOpt = 1 if len(arguments) != 1: print 'you didn\'t specify a SPIRES reference; try \'spires.py -h\' for more information' sys.exit(0) else: ref=arguments[0] if len(options) == 0: bibtexOpt = 1 authorOpt = 1 titleOpt = 1 citeOpt = 1 print ref rType, ref = findRefType(ref) print rType, ref if verboseOpt: print 'the reference ' + ref + ' is a(n) ' + rType if (bibtexOpt + authorOpt + titleOpt + citeOpt + libraryOpt) > 0: BiBTeX = getBiBTeX(ref,rType) if 'no records' in BiBTeX: print BiBTeX sys.exit(0) if bibtexOpt: print BiBTeX if bibitemOpt: bibitem = getBibitem(ref,rType) print bibitem if 'no records' in bibitem: sys.exit(0) if authorOpt: author = extractauthor(BiBTeX) print author if titleOpt: title = extracttitle(BiBTeX) print title if (citeOpt + libraryOpt) > 0: cite = extractcite(BiBTeX) if citeOpt: print '\cite{' + cite + '}' if libraryOpt: updatelibrary(cite,BiBTeX,BiBTeXlibraryFileName) if downloadOpt: downloadeprint(ref,rType,downloadPath)